Molecular typing and sequencing of adenovirus isolated from a conjunctivitis outbreak in a neonatal intensive care unit by PCR

نویسندگان

  • Candan ÇİÇEK
  • Tamer ŞANLIDAĞ
  • Betül SİYAH BİLGİN
  • Hüsnü PULLUKÇU
  • Sinem AKÇALI
  • Özge ALTUN
  • Mehmet YALAZ
  • Nilgün KÜLTÜRSAY
چکیده

Materials and methods: During the NICU outbreak management, 40 clinical samples (from 15 newborn infants and 25 health care providers) were sent to a microbiology laboratory in viral transport media. All the samples were processed using a direct fluorescent antibody (DFA) test and a shell vial cell culture followed by adenovirus polymerase chain reaction (PCR) and DNA sequencing. PCR and DNA sequencing for adenovirus hexon gene hypervariable regions 1–6 were done after DNA extraction from clinical specimens. Adenovirus typing was done using BLAST analysis.

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تاریخ انتشار 2012